Debi, so far, nobody has asked you why you want to tune the melody string to F#.
One guess I have would be: because you want to play a tune that you were told is in the key of F#? If that's the case, then you would not be able to do that while leaving the other two strings in D and A.
Another guess I have would be: that you are thinking about the tuning D-F#-A, which some people have used in the past as an 'easy' 1-3-5 tuning to play in on the dulcimer, because it allows you to play bar chords a lot. But playing in D-F#-A is not the same as playing in D-A-F#.
If you tell us your goal and your reason for wanting to retune your melody string to F#, we can much better help you.
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Instead of high to low, dAD, use low to high, DAd, it is more conventional for MD. For the other part of your question, always pluck the string just before turning the knob on the tuner. That way you know when you tune in the correct direction. As far as the F# A d, that would require a string change. You may be thinking of DF#A which needs different strings also. If you are tuned to DAA, just tune down, loosen, the middle string to F#.